Clustering Result
The histogram above shows the clustering results of HCC in the database. According to this result, we divided CRC-related T cells into 4 categories, and the specific data can be seen in the table below.
In the following image, we demonstrate the clustering plot of T cells in HCC. Different colored dots represent cells of different categories.
After clustering genes in HCC, their properties of p_val, avg_log2FC, pct_1, pct_2, and p_val_adj are analyzed as follows:
p_val: Positive values indicate that the gene is more highly expressed in the first group
avg_log2FC: Log fold-change of the average expression between the two groups
pct_1: The percentage of cells where the gene is detected in the first group
pct_2: The percentage of cells where the gene is detected in the second group
p_val_adj: Adjusted p-value, based on Bonferroni correction using all genes in the dataset
HCC_DataTables
| cluster | cell_type | gene | p_val | avg_log2FC | pct_1 | pct_2 | p_val_adj |
|---|